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- # Copyright 1999-2013 Gentoo Foundation
- # Distributed under the terms of the GNU General Public License v2
- EAPI=5
- PYTHON_COMPAT=( python2_7 )
- inherit eutils python-r1
- DESCRIPTION="GUI for MSMS and displaying its results in PyMOL"
- HOMEPAGE="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html"
- SRC_URI="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/pymol_script/msms_pymol.py -> ${P}.py"
- SLOT="0"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
- LICENSE="BSD pymol"
- IUSE=""
- RDEPEND="
- sci-chemistry/msms-bin
- sci-chemistry/pymol[${PYTHON_USEDEP}]"
- DEPEND="${RDEPEND}"
- src_unpack() {
- mkdir "${S}" || die
- cp "${DISTDIR}"/${A} "${S}/" || die
- }
- src_prepare() {
- epatch "${FILESDIR}"/${PV}-msms.patch
- sed \
- -e "s:GENTOOMSMS:${EPREFIX}/opt/bin/msms:g" \
- -e "s:GENTOOXYZRN:${EPREFIX}/usr/bin/pdb_to_xyzrn:g" \
- -i ${A} || die
- }
- src_install() {
- python_moduleinto pmg_tk/startup
- python_foreach_impl python_domodule ${P}.py
- python_foreach_impl python_optimize
- }
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