MpdAnalysisTreeConverter/batch/start_converter.sh

#!/bin/bash

#
#$ -wd /scratch2/$USER/TMP
#$ -cwd
#$ -l h=!(ncx152.jinr.ru|ncx205.jinr.ru|ncx123.jinr.ru|ncx111.jinr.ru|ncx113.jinr.ru|ncx149.jinr.ru|ncx223.jinr.ru)
#$ -N run_mpddst2analysistree
#$ -q all.q
#$ -l h_rt=0:10:00
#$ -l s_rt=0:10:00
#$ -t 1-20000
#
#$ -o /scratch2/$USER/TMP
#$ -e /scratch2/$USER/TMP
#

export ecm=7.7
export sys=AuAu
export model=UrQMD

export INPUT_FILELIST=/scratch2/parfenov/Soft/SoftQnTest/testAT2/MpdAnalysisTreeConverter/batch/mpddst_pwg3req9_auau.list
export CURRENT_FILE=`sed "${SGE_TASK_ID}q;d" $INPUT_FILELIST`
export COMMIT=${model}_${sys}_${ecm}gev
export START_POSITION=$PWD
export MAIN_DIR=/scratch2/$USER/Soft/SoftQnTest/testAT2/MpdAnalysisTreeConverter
export JOBID=${JOB_ID}

export OUT=$MAIN_DIR/OUT/$COMMIT/$JOBID
export OUT_LOG=$OUT/log
export OUT_FILE=$OUT/files
export LOG=${OUT_LOG}/JOB_${JOB_ID}_${SGE_TASK_ID}.log
export AT_FILE=${OUT_FILE}/JOB_${JOB_ID}_${SGE_TASK_ID}.root
export TMPALL=$MAIN_DIR/TMP
export TMPDIR=$TMPALL/TMP_${JOB_ID}_${SGE_TASK_ID}

# mkdir -p $TMPDIR
mkdir -p $OUT
mkdir -p $OUT_LOG
mkdir -p $OUT_FILE

source /scratch2/parfenov/Soft/MPDROOT/mpdroot_kfparticles/build/config.sh &>> $LOG
export ANALYSISTREE_INC=/scratch2/parfenov/Soft/SoftQnTest/testAT2/AnalysisTree/install-cxx11/include
export ANALYSISTREE_LIB=/scratch2/parfenov/Soft/SoftQnTest/testAT2/AnalysisTree/install-cxx11/lib

_log() {

local format='+%Y/%m/%d-%H:%M:%S'
echo [`date $format`] "$@"

}

echo "Node host name: $HOSTNAME" &>> $LOG
echo "Node architecture name: $ARC" &>> $LOG

echo "Current file: $CURRENT_FILE" &>>$LOG

cd $MAIN_DIR/build/

./MpdDst2AnalysisTree -i $CURRENT_FILE -o $AT_FILE --sqrtSnn $ecm --system $sys &>> $LOG

cd $START_POSITION
_log "Job is done!" &>> $LOG